Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942652.1_cds_XP_016486058.1_76930
CDS Infomation

[gene=LOC107806417] [db_xref=GeneID:107806417] [protein=DEAD-box ATP-dependent RNA helicase 51-like] [protein_id=XP_016486058.1] [location=complement(join(7037..7216,9198..9323,9439..9507,9879..9983,10064..10102,10656..10955,11045..11113,11440..11481,12152..12238,12419..12604,13509..13694,14074..14385))] [gbkey=CDS]
Sequence

ATGGCGGAGGTAGAAGAAAACCCTAATATAGTAGTTGCAGAAGAAGAGTCAATTAAGAAG
AAGCGAAAGAGAAAGAGAGACAAGAAGAATAAAATGGCCATAGAAAAAGAGACGAAGAAG
GAAGAAGAAAGCGAGGGCAAAGAAGAAGAAGAGAATGAGGAAGAAGAGCAGCATAATGAA
CTAAAGGAGGAGATTAAGAAAGAGATGAAGAGTGGTTCCGGTATTATGACTACGGAATTG
TTTTCTTCTCTTGAAATTTCTGAGGCCACTATGAAGGCCATCAACGACATGGGCTTTCAG
CACATGACTCAGATCCAAGCCAGGGCAATTGCTCCTCTTCTGGAAGGCAAAGATGTCCTT
GGAGCTGCAAGAACTGGTTCTGGTAAAACGCTTGCATTTCTGATACCAGCCGTGGAGTTG
TTGTATAATGTCCGTTTTACACCTCGTAATGGAACTGGGGTTATTGTCATTTGCCCAACA
AGAGAACTGGCTATACAGACGCATGCTGTGGCAAAGGACCTTCTCAAGTATCATTCGCAG
ACTCTCGCCTTGGTTATTGGTGGTTCAGCAAGAAGAGCAGAGGCAGAGCGTATTGCAAAA
GGGGCTAATCTCTTAGTAGCCACCCCTGGTCGACTTCTTGATCATCTTAGAAATACCAAA
GGCTTCATTTATAAGAACCTAAAGTGTCTCATGATTGATGAGGCTGATAGGATTTTGGAA
GCGAACTTTGAGGAAGACATGCAGCAAATCATTAAACTTCTACCAAAGCAGGGGAGGCAG
ACTGCTCTCTTTTCAGCCACACAAACAAAAAAGGTTGAGGACCTTGCTCGCTTATCTTTG
GACAAACCTGTCTACATTGATGTGGATGATGGGAGGAGGAGGGTTACAAACGAAGGGCTG
CAACAAGGATACTGTGTTGTCCCAAGCGCTAAGAGATTTCTTCTCCTTTATTCATTCTTG
AAGAGGAACCTGTCAAAGAAAATAATGGTTTTCTTCTCATCTTGCAACTCTGTCAAGTTT
CATTCCGAGCTACTTCGCTATATCAAGATTGAATGCTGTGATATTCATGGGAAGCAAAAG
CAGCAAAAACGAACTTCTACCTTTTTTGAATTCTGTGAAGCAAAAACAGGCATCCTGTTA
TGCACGGATGTCGCCGCACGTGGTCTTGATATTCCTGCTGTGGATTGGATTGTGCAGTTT
GATCCCCCTGATGAACCCAAGGAGTATATACACAGAGTTGGTCGAACAGCGCGCGGGGAA
GGTGCTAAAGGAAATGCATTACTATTCTTGATTCCAGAAGAGTTGCAGTTTCTTAAGTAC
CTCAAGGCGGCAAAAGTGCCTGTAAAAGAATATGAATTTGATCATAAGAAGGTGGCCAAT
GTGCAGTCACTCCTGGAAAAATTGGTCGCAAACAACTATTACTTGAACCAGTCAGCTAAA
GAGGCATATAGGTCCTATATACTAGCATATAATTCTCATTCCATGAAGGAAATATTCAAT
GTTCACCGACTTGATCTACAGGCTGTAGCTTCTTCGTTCTGTTTCTCTAATCCTCCAAAA
GTACACCTCAACATAGATAGCAATGCATCCAAGTTCAGGAACAAAAAGCGTAAAGTTGAG
GGAAGCCGAAATGGGTTCAGTGATAGCAATCCTTACGGAAAGAAAGGAAGTGACGATACG
AGGCAGTTTGTAAGATATTAG

Peptide Sequence

PEP ID

XP_016486058.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like [Nicotiana tabacum]
Sequence

MAEVEENPNIVVAEEESIKKKRKRKRDKKNKMAIEKETKKEEESEGKEEEENEEEEQHNE
LKEEIKKEMKSGSGIMTTELFSSLEISEATMKAINDMGFQHMTQIQARAIAPLLEGKDVL
GAARTGSGKTLAFLIPAVELLYNVRFTPRNGTGVIVICPTRELAIQTHAVAKDLLKYHSQ
TLALVIGGSARRAEAERIAKGANLLVATPGRLLDHLRNTKGFIYKNLKCLMIDEADRILE
ANFEEDMQQIIKLLPKQGRQTALFSATQTKKVEDLARLSLDKPVYIDVDDGRRRVTNEGL
QQGYCVVPSAKRFLLLYSFLKRNLSKKIMVFFSSCNSVKFHSELLRYIKIECCDIHGKQK
QQKRTSTFFEFCEAKTGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGE
GAKGNALLFLIPEELQFLKYLKAAKVPVKEYEFDHKKVANVQSLLEKLVANNYYLNQSAK
EAYRSYILAYNSHSMKEIFNVHRLDLQAVASSFCFSNPPKVHLNIDSNASKFRNKKRKVE
GSRNGFSDSNPYGKKGSDDTRQFVRY

Transcript Sequence

Gene sequence data has not been registered.